I don’t think that’s actually the case. I would argue that we see GRRM laying the groundwork with the street preachers who turn up in King’s Landing in Tyrion V and Tyrion VI of ACOK, and the way they prefigure the riots that explode in Tyrion IX and literally rip the corrupt High Septon to pieces.
What I would say is that I think GRRM missed a trick by not having the religious element be there in the background in ASOS. Now, there are good reasons why that’s not the case – ASOS is a massively over-stuffed book already, with more chapters than any other book in the series – but I do think he could have had some background elements when Jaime and Arya are criss-crossing the Riverlands, or on the streets of King’s Landing with Sansa and Tyrion.